EnhancerDB
  1. Home
  2. SNP
  3. rs555842931[chr1:27464525]
Enhancers that have rs555842931[chr1:27464525]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27456674 27477960 enh171
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs555842931[chr1:27464525]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27464516 27464535 REST JASPAR yes 27680600
chr1 27464522 27464531 TFAP2A JASPAR yes 27680601
Genes associated with rs555842931[chr1:27464525], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More