EnhancerDB
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  3. rs555916454[chr1:153492990]
Enhancers that have rs555916454[chr1:153492990]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 153476105 153501977 enh12269
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs555916454[chr1:153492990]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 153492980 153492999 CTCF JASPAR yes 32256487
chr1 153492989 153492996 SP1 TRANSFAC yes 32256488
chr1 153492989 153492999 SP1 JASPAR yes 32256489
chr1 153492990 153492998 SP1 TRANSFAC yes 32256490
chr1 153492990 153492999 SP1 TRANSFAC yes 32256491
Genes associated with rs555916454[chr1:153492990], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More