EnhancerDB
  1. Home
  2. SNP
  3. rs555955623[chr5:149880097]
Enhancers that have rs555955623[chr5:149880097]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 149879585 149898040 enh22717
Bone Marrow (K562) Colon (HCT116) Adrenal Pancreas Uterus Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs555955623[chr5:149880097]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 149880085 149880105 RREB1 JASPAR yes 66884800
chr5 149880091 149880101 SP1 JASPAR yes 66884801
chr5 149880093 149880098 SP1 TRANSFAC yes 66884802
chr5 149880094 149880104 SREBF1 JASPAR yes 66884803
chr5 149880094 149880104 SREBF2 JASPAR yes 66884804
Genes associated with rs555955623[chr5:149880097], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More