EnhancerDB
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  3. rs555966970[chr1:9515852]
Enhancers that have rs555966970[chr1:9515852]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9492342 9521379 enh11486
Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs555966970[chr1:9515852]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9515850 9515861 HOXC13 JASPAR yes 26653204
chr1 9515850 9515861 HOXD12 JASPAR yes 26653205
chr1 9515851 9515860 CDX1 JASPAR yes 26653206
chr1 9515851 9515861 HOXA13 JASPAR yes 26653207
chr1 9515851 9515861 HOXB13 JASPAR yes 26653208
chr1 9515851 9515861 HOXC10 JASPAR yes 26653209
chr1 9515851 9515861 HOXD11 JASPAR yes 26653210
chr1 9515851 9515861 HOXD13 JASPAR yes 26653211
Genes associated with rs555966970[chr1:9515852], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More