EnhancerDB
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  3. rs555986858[chr1:12606317]
Enhancers that have rs555986858[chr1:12606317]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12597605 12619763 enh11515
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs555986858[chr1:12606317]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12606313 12606331 RARA JASPAR yes 26832091
chr1 12606317 12606331 NR2F1 JASPAR yes 26832092
Genes associated with rs555986858[chr1:12606317], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More