EnhancerDB
  1. Home
  2. SNP
  3. rs555989015[chr1:172899939]
Enhancers that have rs555989015[chr1:172899939]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172893305 172912815 enh12378
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Brain (SK-N-MC) Esophagus Astrocyte Brain (SK-N-SH) Stomach Muscle (A673) Placenta Muscle (Myoblast) Spleen Uterus Heart
Transcript factors that have rs555989015[chr1:172899939]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172899919 172899939 RREB1 JASPAR yes 33167751
chr1 172899921 172899941 RREB1 JASPAR yes 33167752
chr1 172899923 172899943 RREB1 JASPAR yes 33167753
chr1 172899925 172899945 RREB1 JASPAR yes 33167754
chr1 172899927 172899947 RREB1 JASPAR yes 33167755
chr1 172899929 172899949 RREB1 JASPAR yes 33167756
chr1 172899931 172899951 RREB1 JASPAR yes 33167757
chr1 172899933 172899953 RREB1 JASPAR yes 33167758
chr1 172899935 172899955 RREB1 JASPAR yes 33167759
chr1 172899937 172899957 RREB1 JASPAR yes 33167760
chr1 172899939 172899959 RREB1 JASPAR yes 33167761
Genes associated with rs555989015[chr1:172899939], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More