EnhancerDB
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  3. rs555998309[chr1:185623672]
Enhancers that have rs555998309[chr1:185623672]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 185611645 185629075 enh12480
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs555998309[chr1:185623672]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 185623652 185623673 ZNF263 JASPAR yes 33831340
chr1 185623653 185623674 IRF1 JASPAR yes 33831341
chr1 185623659 185623674 FOXP1 JASPAR yes 33831344
Genes associated with rs555998309[chr1:185623672], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More