EnhancerDB
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  3. rs556020668[chr2:28909327]
Enhancers that have rs556020668[chr2:28909327]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28895045 28921335 enh18395
Bone Marrow (K562) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs556020668[chr2:28909327]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28909312 28909327 FOXA1 JASPAR yes 72668891
chr2 28909323 28909344 IRF1 JASPAR yes 72668897
chr2 28909325 28909346 IRF1 JASPAR yes 72668898
chr2 28909326 28909341 FOXP1 JASPAR yes 72668899
Genes associated with rs556020668[chr2:28909327], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More