EnhancerDB
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  3. rs556036420[chr17:62995035]
Enhancers that have rs556036420[chr17:62995035]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62953485 63000035 enh4531
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs556036420[chr17:62995035]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62994352 62996366 ZNF274 GTRD no Bone Marrow (K562) 21780903
chr17 62994408 62996234 ZBTB33 GTRD no Lung (A549) 21780904
chr17 62994453 62995526 ZNF274 GTRD no Bone Marrow (K562) 21780905
chr17 62994514 62995756 ZBTB33 GTRD no Brain (SK-N-SH) 21780906
chr17 62994536 62996619 TEF1 GTRD no Bone (Osteoblast) 21780907
chr17 62994558 62996225 ZBTB33 GTRD no Lung (A549) 21780908
chr17 62994582 62995951 ZNF274 GTRD no Bone Marrow (K562) 21780909
chr17 62994596 62995271 ZBTB33 GTRD no Brain (SK-N-SH) 21780910
chr17 62994611 62995997 ZNF274 GTRD no Bone Marrow (K562) 21780911
chr17 62994627 62996837 ZNF143 GTRD no Epithelial (MCF-7) 21780912
chr17 62994628 62996242 ZNF274 GTRD no Bone Marrow (K562) 21780913
chr17 62994646 62996102 ZNF274 GTRD no Bone Marrow (K562) 21780914
chr17 62994657 62996005 ZNF274 GTRD no Bone Marrow (K562) 21780915
chr17 62994663 62996008 ZNF274 GTRD no Cervix (HeLa-S3) 21780916
chr17 62994685 62996002 ZBTB33 GTRD no Lung (A549) 21780917
chr17 62994711 62995306 ZNF274 GTRD no Liver (HepG2) 21780918
chr17 62994714 62996143 ZNF274 GTRD no Bone Marrow (K562) 21780919
chr17 62994734 62995579 ZNF274 GTRD no Bone Marrow (K562) 21780920
chr17 62994735 62995518 ZNF274 GTRD no Bone Marrow (K562) 21780921
chr17 62994765 62995271 ZNF274 GTRD no Cervix (HeLa-S3) 21780922
chr17 62994781 62996071 ZNF143 GTRD no Epithelial (MCF-7) 21780923
chr17 62994799 62995306 ZNF274 GTRD no Liver (HepG2) 21780924
chr17 62994804 62995300 ZNF274 GTRD no Liver (HepG2) 21780925
chr17 62994811 62995493 ZBTB33 GTRD no Brain (SK-N-SH) 21780926
chr17 62994834 62995246 TCF7L2 GTRD no Colon (HCT116) 21780927
chr17 62994894 62995444 ZNF274 GTRD no Bone Marrow (K562) 21780928
chr17 62994896 62996172 ZNF274 GTRD no Bone Marrow (K562) 21780929
chr17 62994902 62995258 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21780930
chr17 62994907 62995872 ZNF274 GTRD no Bone Marrow (K562) 21780931
chr17 62994926 62995767 ZNF274 GTRD no Bone Marrow (K562) 21780932
chr17 62994926 62996150 ZBTB33 GTRD no Lung (A549) 21780933
chr17 62994938 62996681 ZNF143 GTRD no Epithelial (MCF-7) 21780934
chr17 62994939 62995448 ZNF274 GTRD no Bone Marrow (K562) 21780935
chr17 62994982 62996003 ZNF274 GTRD no Cervix (HeLa-S3) 21780936
chr17 62994991 62995613 ZNF274 GTRD no Bone Marrow (K562) 21780937
chr17 62994992 62995311 ZNF274 GTRD no Bone Marrow (K562) 21780938
chr17 62995010 62995374 ZNF274 GTRD no Bone Marrow (K562) 21780939
chr17 62995030 62995051 IRF1 JASPAR yes 55337412
chr17 62995031 62995046 FOXP1 JASPAR yes 55337413
chr17 62995031 62995052 IRF1 JASPAR yes 55337414
chr17 62995034 62995038 YY1 TRANSFAC yes 55337415
chr17 62995035 62995050 FOXP1 JASPAR yes 55337416
Genes associated with rs556036420[chr17:62995035], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More