EnhancerDB
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Enhancers that have rs556042614[chr1:201703275]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201670008 201708415 enh12526
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Spleen Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs556042614[chr1:201703275]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201703264 201703277 SMAD2 JASPAR yes 34526203
chr1 201703265 201703278 EOMES JASPAR yes 34526204
chr1 201703267 201703277 TBR1 JASPAR yes 34526205
chr1 201703267 201703278 TBX20 JASPAR yes 34526206
chr1 201703267 201703278 TBX2 JASPAR yes 34526207
chr1 201703268 201703278 TBX21 JASPAR yes 34526208
chr1 201703269 201703277 MGA JASPAR yes 34526209
chr1 201703269 201703277 TBX15 JASPAR yes 34526210
chr1 201703269 201703277 TBX1 JASPAR yes 34526211
chr1 201703269 201703277 TBX4 JASPAR yes 34526212
chr1 201703269 201703277 TBX5 JASPAR yes 34526213
chr1 201703269 201703281 TGIF1 JASPAR yes 34526214
Genes associated with rs556042614[chr1:201703275], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More