EnhancerDB
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  3. rs556047999[chr17:59410972]
Enhancers that have rs556047999[chr17:59410972]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 59383635 59420035 enh17269
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs556047999[chr17:59410972]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 59410966 59410987 IRF1 JASPAR yes 55149843
chr17 59410968 59410983 PRDM1 JASPAR yes 55149844
chr17 59410968 59410983 STAT2 JASPAR yes 55149845
chr17 59410969 59410983 SPIC JASPAR yes 55149846
chr17 59410969 59410983 STAT1 JASPAR yes 55149847
chr17 59410970 59410985 IRF9 JASPAR yes 55149848
chr17 59410970 59410991 IRF1 JASPAR yes 55149849
chr17 59410971 59410986 FOXP1 JASPAR yes 55149850
chr17 59410972 59410987 STAT2 JASPAR yes 55149851
Genes associated with rs556047999[chr17:59410972], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More