EnhancerDB
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  3. rs556078908[chr19:8050584]
Enhancers that have rs556078908[chr19:8050584]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 8047175 8065236 enh17899
Skin (Keratinocyte) Prostate (PC-3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Stomach Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs556078908[chr19:8050584]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 8049862 8051475 TCF7L2 GTRD no Colon (HCT116) 21847238
chr19 8049862 8051475 TCF7L2 GTRD no Colon (HCT116) 108381567
chr19 8049914 8051449 ZNF274 GTRD no Blood (GM12878) 108381568
chr19 8049925 8051501 ZNF274 GTRD no Cervix (HeLa-S3) 108381569
chr19 8049930 8051508 TCF7L2 GTRD no Colon (HCT116) 21847239
chr19 8049930 8051508 TCF7L2 GTRD no Colon (HCT116) 108381570
chr19 8049939 8051502 ZNF274 GTRD no Bone Marrow (K562) 108381571
chr19 8049939 8051647 ZNF274 GTRD no Bone Marrow (K562) 108381572
chr19 8049945 8051498 ZNF274 GTRD no Bone Marrow (K562) 108381573
chr19 8050025 8051610 ZNF274 GTRD no Bone Marrow (K562) 108381574
chr19 8050092 8051478 ZNF274 GTRD no Bone Marrow (K562) 108381575
chr19 8050154 8051544 ZNF274 GTRD no Bone Marrow (K562) 108381576
chr19 8050262 8051492 ZNF274 GTRD no Bone Marrow (K562) 108381577
chr19 8050490 8051668 ZNF274 GTRD no Bone Marrow (K562) 108381578
chr19 8050572 8050593 ZNF263 JASPAR yes 112347519
chr19 8050580 8050601 ZNF263 JASPAR yes 112347520
chr19 8050583 8050603 RREB1 JASPAR yes 112347521
Genes associated with rs556078908[chr19:8050584], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More