EnhancerDB
  1. Home
  2. SNP
  3. rs556173195[chr3:8546154]
Enhancers that have rs556173195[chr3:8546154]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 8538945 8574055 enh35162
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs556173195[chr3:8546154]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 8546145 8546160 STAT2 JASPAR yes 297827
chr3 8546146 8546160 STAT1 JASPAR yes 297828
chr3 8546147 8546158 ETV2 JASPAR yes 297829
chr3 8546149 8546155 ETS1 JASPAR yes 297830
chr3 8546149 8546168 PAX5 JASPAR yes 297831
Genes associated with rs556173195[chr3:8546154], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More