EnhancerDB
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  3. rs556180138[chr12:113679568]
Enhancers that have rs556180138[chr12:113679568]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 113663085 113691755 enh2610
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs556180138[chr12:113679568]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 113679559 113679579 RREB1 JASPAR yes 123819343
chr12 113679565 113679585 RREB1 JASPAR yes 123819344
chr12 113679567 113679587 RREB1 JASPAR yes 123819345
Genes associated with rs556180138[chr12:113679568], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More