EnhancerDB
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  3. rs556192900[chr1:54765327]
Enhancers that have rs556192900[chr1:54765327]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54761072 54782679 enh11866
Liver (HepG2) Brain (SK-N-SH) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs556192900[chr1:54765327]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54763077 54767289 ZNF274 GTRD no Bone Marrow (K562) 107804699
chr1 54763077 54767289 ZNF274 GTRD no Bone Marrow (K562) 107804700
chr1 54763095 54765406 ZNF274 GTRD no Bone Marrow (K562) 107804701
chr1 54763163 54765510 ZNF274 GTRD no Bone Marrow (K562) 107804702
chr1 54763359 54765366 ZNF274 GTRD no Blood (GM12878) 107804704
chr1 54763388 54766404 ZNF274 GTRD no Bone Marrow (K562) 107804705
chr1 54763388 54766404 ZNF274 GTRD no Bone Marrow (K562) 107804706
chr1 54763459 54765412 ZNF274 GTRD no Bone Marrow (K562) 107804708
chr1 54763494 54765480 ZNF274 GTRD no Blood (GM12878) 107804710
chr1 54763557 54765348 ZNF274 GTRD no Liver (HepG2) 107804712
chr1 54763573 54765363 ZNF274 GTRD no Blood (GM12878) 107804714
chr1 54763602 54765347 ZNF274 GTRD no Liver (HepG2) 107804717
chr1 54763671 54766180 ZNF143 GTRD no Epithelial (MCF-7) 107804721
chr1 54763854 54765346 ZBTB33 GTRD no Lung (A549) 107804730
chr1 54763864 54765405 ZNF143 GTRD no Epithelial (MCF-7) 107804731
chr1 54763935 54765332 ZNF274 GTRD no Liver (HepG2) 107804739
chr1 54764067 54765386 ZNF143 GTRD no Epithelial (MCF-7) 107804743
chr1 54764081 54765377 ZNF274 GTRD no Liver (HepG2) 107804744
chr1 54764243 54765466 ZNF143 GTRD no Epithelial (MCF-7) 107804754
chr1 54764344 54765327 ZNF274 GTRD no Bone Marrow (K562) 107804761
chr1 54764403 54765381 ZNF143 GTRD no Epithelial (MCF-7) 107804766
Genes associated with rs556192900[chr1:54765327], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More