EnhancerDB
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  3. rs556213612[chr17:59413955]
Enhancers that have rs556213612[chr17:59413955]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 59383635 59420035 enh17269
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs556213612[chr17:59413955]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 59413939 59413956 NR3C1 JASPAR yes 55150215
chr17 59413939 59413956 NR3C2 JASPAR yes 55150216
chr17 59413953 59413962 NFIX JASPAR yes 55150217
chr17 59413955 59413961 NFIC JASPAR yes 55150218
Genes associated with rs556213612[chr17:59413955], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More