EnhancerDB
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  3. rs556218240[chr1:211517542]
Enhancers that have rs556218240[chr1:211517542]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 211498150 211519175 enh904
Cervix (HeLa-S3) Large Intestine Blood (T-cell) Esophagus Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Muscle (Myotube) Thymus Epithelial (MCF-7)
chr1 211517513 211517976 vista4959
VISTA
Transcript factors that have rs556218240[chr1:211517542]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 211513300 211518875 ZNF274 GTRD no Cervix (HeLa-S3) 21375813
chr1 211513300 211518875 ZNF274 GTRD no Cervix (HeLa-S3) 107867208
chr1 211513553 211517648 ZNF274 GTRD no Cervix (HeLa-S3) 21375814
chr1 211513553 211517648 ZNF274 GTRD no Cervix (HeLa-S3) 107867209
chr1 211516376 211517596 ZNF274 GTRD no Blood (GM12878) 21375816
chr1 211516376 211517596 ZNF274 GTRD no Blood (GM12878) 107867211
chr1 211516623 211517643 ZNF274 GTRD no Bone Marrow (K562) 107867213
chr1 211516623 211517744 ZNF274 GTRD no Bone Marrow (K562) 107867214
chr1 211516928 211517678 ZNF143 GTRD no Epithelial (MCF-7) 21375819
chr1 211516928 211517678 ZNF143 GTRD no Epithelial (MCF-7) 107867216
chr1 211516930 211517575 TCF7L2 GTRD no Colon (HCT116) 107867217
chr1 211517021 211517549 ZNF274 GTRD no Bone Marrow (K562) 107867219
chr1 211517027 211517545 ZNF274 GTRD no Bone Marrow (K562) 107867220
chr1 211517082 211517556 TCF7L2 GTRD no Colon (HCT116) 107867222
chr1 211517088 211517554 ZNF143 GTRD no Epithelial (MCF-7) 21375821
chr1 211517088 211517554 ZNF143 GTRD no Epithelial (MCF-7) 107867223
chr1 211517092 211517682 TCF7L2 GTRD no Colon (HCT116) 107867225
chr1 211517184 211517595 ZNF274 GTRD no Bone Marrow (K562) 107867226
chr1 211517518 211518068 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107867227
chr1 211517521 211517542 ZNF263 JASPAR yes 35055046
chr1 211517521 211517542 ZNF263 JASPAR yes 118451067
chr1 211517540 211517551 ESRRB JASPAR yes 35055048
chr1 211517540 211517551 ESRRB JASPAR yes 118451069
Genes associated with rs556218240[chr1:211517542], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More