EnhancerDB
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  3. rs556281161[chr12:125385250]
Enhancers that have rs556281161[chr12:125385250]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125380716 125396135 enh2679
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs556281161[chr12:125385250]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125384747 125385311 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21583269
chr12 125384758 125385302 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21583270
chr12 125384766 125385382 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21583271
chr12 125385241 125385813 ZNF274 GTRD no Liver (HepG2) 21583289
chr12 125385246 125385266 ESR1 JASPAR yes 124431237
chr12 125385250 125385268 NR3C1 JASPAR yes 124431238
Genes associated with rs556281161[chr12:125385250], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More