EnhancerDB
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  3. rs556306900[chr1:27048754]
Enhancers that have rs556306900[chr1:27048754]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27041525 27053715 enh11655
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs556306900[chr1:27048754]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27048740 27048755 FOXP1 JASPAR yes 27653087
chr1 27048743 27048754 FOXA1 JASPAR yes 27653089
chr1 27048744 27048759 FOXP1 JASPAR yes 27653090
chr1 27048745 27048754 SRY JASPAR yes 27653091
chr1 27048745 27048756 FOXP2 JASPAR yes 27653092
chr1 27048747 27048755 FOXO3 JASPAR yes 27653093
Genes associated with rs556306900[chr1:27048754], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More