EnhancerDB
  1. Home
  2. SNP
  3. rs556310778[chr2:39643147]
Enhancers that have rs556310778[chr2:39643147]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 39624677 39646761 enh18467
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Liver Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Breast Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs556310778[chr2:39643147]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 39643136 39643148 MEF2A JASPAR yes 73198818
chr2 39643137 39643147 MEF2A JASPAR yes 73198819
chr2 39643140 39643155 MEF2C JASPAR yes 73198821
chr2 39643141 39643156 MEF2A JASPAR yes 73198822
chr2 39643142 39643147 TBP TRANSFAC yes 73198824
chr2 39643142 39643148 TFIID TRANSFAC yes 73198825
chr2 39643142 39643153 FOXC1 JASPAR yes 73198826
chr2 39643142 39643154 MEF2A JASPAR yes 73198827
chr2 39643142 39643154 MEF2B JASPAR yes 73198828
chr2 39643142 39643154 MEF2D JASPAR yes 73198829
chr2 39643143 39643153 MEF2A JASPAR yes 73198830
Genes associated with rs556310778[chr2:39643147], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More