EnhancerDB
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  3. rs556316164[chr17:41534739]
Enhancers that have rs556316164[chr17:41534739]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41518125 41539515 enh17169
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Prostate (RWPE1) Cervix (HeLa-S3) Esophagus Astrocyte Lung (A549) Stomach Placenta Thyroid Adrenal Lung (PC-9) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs556316164[chr17:41534739]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41534225 41534789 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21760667
chr17 41534264 41534740 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21760674
chr17 41534298 41534747 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21760677
chr17 41534386 41534890 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21760691
chr17 41534443 41534773 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21760696
chr17 41534519 41534809 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21760698
chr17 41534686 41538133 ZNF143 GTRD no Epithelial (MCF-7) 21760699
chr17 41534689 41535730 ZBTB33 GTRD no Lung (A549) 21760700
chr17 41534724 41535747 ZBTB33 GTRD no Lung (A549) 21760701
chr17 41534735 41534739 YY1 TRANSFAC yes 54349328
chr17 41534739 41534743 YY1 TRANSFAC yes 54349329
Genes associated with rs556316164[chr17:41534739], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More