EnhancerDB
  1. Home
  2. SNP
  3. rs556338794[chr1:41336083]
Enhancers that have rs556338794[chr1:41336083]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41333905 41349008 enh11777
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Heart
Transcript factors that have rs556338794[chr1:41336083]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41336072 41336086 EBF1 JASPAR yes 28348125
chr1 41336073 41336085 TFAP2A JASPAR yes 28348126
chr1 41336073 41336085 TFAP2B JASPAR yes 28348127
chr1 41336073 41336085 TFAP2C JASPAR yes 28348128
chr1 41336073 41336088 TFAP2A JASPAR yes 28348129
chr1 41336073 41336088 TFAP2C JASPAR yes 28348130
chr1 41336074 41336083 TFAP2A JASPAR yes 28348131
chr1 41336074 41336085 EBF1 JASPAR yes 28348132
chr1 41336078 41336083 TFAP2A TRANSFAC yes 28348133
chr1 41336078 41336084 MZF1 JASPAR yes 28348134
Genes associated with rs556338794[chr1:41336083], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More