EnhancerDB
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  3. rs556345639[chr15:40361281]
Enhancers that have rs556345639[chr15:40361281]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 40353665 40379655 enh16061
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr15 40361212 40361596 vista19718
VISTA
Transcript factors that have rs556345639[chr15:40361281]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 40357371 40361543 ZNF274 GTRD no Bone Marrow (K562) 21649685
chr15 40357371 40361543 ZNF274 GTRD no Bone Marrow (K562) 108133816
chr15 40361203 40361747 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21649817
chr15 40361203 40361747 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108133817
chr15 40361228 40361828 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108133818
chr15 40361254 40361724 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21649818
chr15 40361254 40361724 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108133819
chr15 40361254 40361938 POLR2A UCSC Txn Factor no Conserved 108133820
chr15 40361269 40361705 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21649819
chr15 40361269 40361705 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108133821
chr15 40361271 40361283 ZBTB7C JASPAR yes 22926024
chr15 40361271 40361283 ZBTB7C JASPAR yes 70511423
chr15 40361272 40361736 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21649820
chr15 40361272 40361736 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108133822
chr15 40361276 40361281 MYC TRANSFAC yes 22926025
chr15 40361276 40361281 MYC TRANSFAC yes 70511424
chr15 40361276 40361760 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108133823
chr15 40361279 40361719 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21649821
chr15 40361279 40361719 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108133824
Genes associated with rs556345639[chr15:40361281], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More