EnhancerDB
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  3. rs556358998[chr2:27941611]
Enhancers that have rs556358998[chr2:27941611]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 27941049 27963575 enh18376
Astrocyte Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs556358998[chr2:27941611]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 27941590 27941611 IRF1 JASPAR yes 72584562
chr2 27941591 27941612 IRF1 JASPAR yes 72584563
chr2 27941592 27941613 IRF1 JASPAR yes 72584565
chr2 27941596 27941611 FOXP1 JASPAR yes 72584569
chr2 27941597 27941612 FOXP1 JASPAR yes 72584570
chr2 27941598 27941613 FOXP1 JASPAR yes 72584571
chr2 27941599 27941614 FOXP1 JASPAR yes 72584572
Genes associated with rs556358998[chr2:27941611], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More