EnhancerDB
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  3. rs556382985[chr17:25855945]
Enhancers that have rs556382985[chr17:25855945]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25838865 25883455 enh17064
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs556382985[chr17:25855945]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25855929 25855950 IRF1 JASPAR yes 53641471
chr17 25855933 25855947 STAT1 JASPAR yes 53641474
chr17 25855933 25855948 STAT2 JASPAR yes 53641475
chr17 25855937 25855957 RREB1 JASPAR yes 53641476
chr17 25855940 25855955 RUNX2 JASPAR yes 53641477
chr17 25855941 25855950 RUNX2 JASPAR yes 53641478
chr17 25855941 25855951 RUNX3 JASPAR yes 53641479
chr17 25855941 25855952 RUNX1 JASPAR yes 53641480
Genes associated with rs556382985[chr17:25855945], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More