EnhancerDB
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  3. rs556420617[chr1:218640858]
Enhancers that have rs556420617[chr1:218640858]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 218626305 218642655 enh27510
Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs556420617[chr1:218640858]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 218640291 218640887 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21380782
chr1 218640847 218640865 NFYA JASPAR yes 35382635
chr1 218640850 218640866 NFYA JASPAR yes 35382636
chr1 218640853 218640868 NFYB JASPAR yes 35382637
chr1 218640855 218640860 NFY TRANSFAC yes 35382638
Genes associated with rs556420617[chr1:218640858], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More