EnhancerDB
  1. Home
  2. SNP
  3. rs556430589[chr5:90606447]
Enhancers that have rs556430589[chr5:90606447]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 90595425 90613326 enh22427
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs556430589[chr5:90606447]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 90606427 90606448 IRF1 JASPAR yes 64191393
chr5 90606429 90606450 IRF1 JASPAR yes 64191394
chr5 90606433 90606454 IRF1 JASPAR yes 64191395
chr5 90606435 90606450 PRDM1 JASPAR yes 64191396
chr5 90606435 90606450 STAT2 JASPAR yes 64191397
chr5 90606436 90606450 SPIC JASPAR yes 64191398
chr5 90606436 90606450 STAT1 JASPAR yes 64191399
chr5 90606437 90606458 IRF1 JASPAR yes 64191400
chr5 90606438 90606453 FOXP1 JASPAR yes 64191401
chr5 90606440 90606455 FOXP1 JASPAR yes 64191402
chr5 90606442 90606457 FOXP1 JASPAR yes 64191403
chr5 90606443 90606458 FOXP1 JASPAR yes 64191404
chr5 90606444 90606459 FOXP1 JASPAR yes 64191405
Genes associated with rs556430589[chr5:90606447], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More