EnhancerDB
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  3. rs556440816[chr16:89372094]
Enhancers that have rs556440816[chr16:89372094]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89371847 89409975 enh16905
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs556440816[chr16:89372094]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89369859 89372452 TCF7L2 GTRD no Colon (HCT116) 21738055
chr16 89369859 89372452 TCF7L2 GTRD no Colon (HCT116) 108225492
chr16 89372087 89372099 HES5 JASPAR yes 12328709
chr16 89372087 89372099 HES7 JASPAR yes 12328710
chr16 89372088 89372098 HEY1 JASPAR yes 12328711
chr16 89372088 89372098 HEY2 JASPAR yes 12328712
Genes associated with rs556440816[chr16:89372094], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More