EnhancerDB
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  3. rs556466106[chr2:25537472]
Enhancers that have rs556466106[chr2:25537472]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 25506105 25541255 enh18357
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Esophagus Placenta Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs556466106[chr2:25537472]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 25537453 25537473 RREB1 JASPAR yes 72465456
chr2 25537458 25537472 GLIS2 JASPAR yes 72465458
chr2 25537458 25537472 GLIS3 JASPAR yes 72465459
chr2 25537458 25537473 ZIC3 JASPAR yes 72465460
chr2 25537465 25537475 MAX JASPAR yes 72465464
chr2 25537466 25537476 MNT JASPAR yes 72465465
chr2 25537467 25537474 USF1 JASPAR yes 72465466
chr2 25537468 25537473 MYC TRANSFAC yes 72465467
chr2 25537468 25537473 USF1 TRANSFAC yes 72465468
chr2 25537468 25537473 USF2 TRANSFAC yes 72465469
chr2 25537468 25537475 USF1 JASPAR yes 72465470
chr2 25537470 25537483 ELF1 JASPAR yes 72465471
Genes associated with rs556466106[chr2:25537472], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More