EnhancerDB
  1. Home
  2. SNP
  3. rs556490031[chr17:71294134]
Enhancers that have rs556490031[chr17:71294134]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 71282705 71302156 enh17360
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs556490031[chr17:71294134]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 71294116 71294136 RREB1 JASPAR yes 55859787
chr17 71294129 71294150 IRF1 JASPAR yes 55859789
chr17 71294133 71294148 FOXP1 JASPAR yes 55859790
chr17 71294134 71294149 FOXP1 JASPAR yes 55859791
chr17 71294134 71294155 IRF1 JASPAR yes 55859792
Genes associated with rs556490031[chr17:71294134], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More