EnhancerDB
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  3. rs556493502[chr1:19327342]
Enhancers that have rs556493502[chr1:19327342]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19322701 19342495 enh11568
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs556493502[chr1:19327342]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19327334 19327348 SPIC JASPAR yes 27169251
chr1 19327335 19327348 ELF1 JASPAR yes 27169252
chr1 19327336 19327348 EHF JASPAR yes 27169254
chr1 19327336 19327348 ELF1 JASPAR yes 27169255
chr1 19327336 19327349 ELF3 JASPAR yes 27169256
chr1 19327337 19327348 ELF5 JASPAR yes 27169257
chr1 19327337 19327348 ETV2 JASPAR yes 27169258
chr1 19327338 19327348 ERF JASPAR yes 27169259
chr1 19327338 19327348 ERG JASPAR yes 27169260
chr1 19327338 19327348 ETS1 JASPAR yes 27169261
chr1 19327338 19327348 FEV JASPAR yes 27169262
chr1 19327338 19327348 FLI1 JASPAR yes 27169263
chr1 19327338 19327349 FLI1 JASPAR yes 27169264
chr1 19327339 19327347 FEV JASPAR yes 27169265
Genes associated with rs556493502[chr1:19327342], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More