EnhancerDB
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  3. rs556519632[chr1:27898121]
Enhancers that have rs556519632[chr1:27898121]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27879543 27929405 enh11668
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
chr1 27897947 27898332 vista928
VISTA
Transcript factors that have rs556519632[chr1:27898121]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27897976 27898226 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107802594
chr1 27898118 27898128 MZF1 JASPAR yes 27710621
chr1 27898118 27898128 SP1 JASPAR yes 27710622
chr1 27898118 27898128 ZNF740 JASPAR yes 27710623
chr1 27898118 27898128 MZF1 JASPAR yes 118258606
chr1 27898118 27898128 SP1 JASPAR yes 118258607
chr1 27898118 27898128 ZNF740 JASPAR yes 118258608
chr1 27898119 27898129 SP1 JASPAR yes 27710624
chr1 27898119 27898129 ZNF740 JASPAR yes 27710625
chr1 27898119 27898129 SP1 JASPAR yes 118258609
chr1 27898119 27898129 ZNF740 JASPAR yes 118258610
chr1 27898120 27898130 SP1 JASPAR yes 27710626
chr1 27898120 27898130 ZNF740 JASPAR yes 27710627
chr1 27898120 27898130 SP1 JASPAR yes 118258611
chr1 27898120 27898130 ZNF740 JASPAR yes 118258612
chr1 27898121 27898131 ZNF740 JASPAR yes 27710628
chr1 27898121 27898131 ZNF740 JASPAR yes 118258613
Genes associated with rs556519632[chr1:27898121], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More