EnhancerDB
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  3. rs55653588[chr17:10028397]
Enhancers that have rs55653588[chr17:10028397]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 10015545 10033776 enh4251
Brain (SK-N-SH) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs55653588[chr17:10028397]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 10028382 10028397 FOXP1 JASPAR yes 53090042
chr17 10028382 10028403 IRF1 JASPAR yes 53090043
chr17 10028383 10028398 FOXP1 JASPAR yes 53090045
chr17 10028384 10028399 FOXP1 JASPAR yes 53090046
chr17 10028395 10028405 ZNF740 JASPAR yes 53090047
chr17 10028397 10028407 SP1 JASPAR yes 53090048
chr17 10028397 10028407 ZNF740 JASPAR yes 53090049
Genes associated with rs55653588[chr17:10028397], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More