EnhancerDB
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  3. rs556539435[chr16:70461235]
Enhancers that have rs556539435[chr16:70461235]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 70459605 70472113 enh4121
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs556539435[chr16:70461235]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 70461056 70461957 TCF7L2 GTRD no Colon (HCT116) 21712713
chr16 70461056 70461957 TCF7L2 GTRD no Colon (HCT116) 108204296
chr16 70461235 70461256 IRF1 JASPAR yes 11317511
Genes associated with rs556539435[chr16:70461235], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More