EnhancerDB
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  3. rs556542387[chr17:29919444]
Enhancers that have rs556542387[chr17:29919444]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 29918764 29929790 enh17097
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Liver Bone (Osteoblast) Lung (A549) Stomach Placenta Pancreas (Panc1) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs556542387[chr17:29919444]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 29918884 29919953 ZBTB33 GTRD no Brain (SK-N-SH) 21750186
chr17 29918905 29919811 ZBTB33 GTRD no Brain (SK-N-SH) 21750187
chr17 29918924 29919918 ZBTB33 GTRD no Brain (SK-N-SH) 21750188
chr17 29918957 29920005 ZBTB33 GTRD no Brain (SK-N-SH) 21750189
chr17 29919058 29919929 ZBTB33 GTRD no Brain (SK-N-SH) 21750190
chr17 29919168 29919995 ZNF274 GTRD no Cervix (HeLa-S3) 21750191
chr17 29919242 29919673 ZBTB33 GTRD no Brain (SK-N-SH) 21750192
chr17 29919259 29919934 ZNF274 GTRD no Cervix (HeLa-S3) 21750193
chr17 29919336 29919848 ZBTB33 GTRD no Brain (SK-N-SH) 21750194
chr17 29919339 29919903 ZBTB33 GTRD no Brain (SK-N-SH) 21750195
chr17 29919357 29919660 ZNF274 GTRD no Cervix (HeLa-S3) 21750196
chr17 29919397 29919949 ZBTB33 GTRD no Brain (SK-N-SH) 21750197
chr17 29919440 29919460 RREB1 JASPAR yes 53848579
chr17 29919444 29919464 RREB1 JASPAR yes 53848580
Genes associated with rs556542387[chr17:29919444], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More