EnhancerDB
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  3. rs55654246[chr16:21525988]
Enhancers that have rs55654246[chr16:21525988]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 21511505 21540535 enh3934
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Neural Stem Cells (H9) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs55654246[chr16:21525988]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 21522750 21528364 ZNF274 GTRD no Liver (HepG2) 21696708
chr16 21522826 21526554 ZNF274 GTRD no Liver (HepG2) 21696717
chr16 21522884 21526510 ZNF274 GTRD no Liver (HepG2) 21696722
chr16 21523049 21527657 TEF1 GTRD no Bone (Osteoblast) 21696724
chr16 21523361 21526849 ZNF143 GTRD no Epithelial (MCF-7) 21696734
chr16 21523584 21526047 ZNF274 GTRD no Liver (HepG2) 21696745
chr16 21524139 21526009 ZNF274 GTRD no Liver (HepG2) 21696779
chr16 21524203 21527483 ZNF274 GTRD no Bone Marrow (K562) 21696781
chr16 21524270 21526558 ZNF274 GTRD no Liver (HepG2) 21696782
chr16 21524401 21526034 ZNF274 GTRD no Bone Marrow (K562) 21696784
chr16 21524556 21526440 ZNF274 GTRD no Bone Marrow (K562) 21696787
chr16 21524564 21526487 ZNF274 GTRD no Liver (HepG2) 21696788
chr16 21524681 21526614 ZNF274 GTRD no Liver (HepG2) 21696789
chr16 21524743 21526309 ZNF274 GTRD no Liver (HepG2) 21696792
chr16 21524757 21526214 ZNF274 GTRD no Liver (HepG2) 21696793
chr16 21524815 21526496 ZNF274 GTRD no Bone Marrow (K562) 21696794
chr16 21524819 21526402 ZNF274 GTRD no Liver (HepG2) 21696795
chr16 21524823 21528217 ZNF274 GTRD no Liver (HepG2) 21696796
chr16 21524830 21526411 ZNF274 GTRD no Liver (HepG2) 21696797
chr16 21524860 21526516 ZNF274 GTRD no Liver (HepG2) 21696800
chr16 21524874 21526386 ZNF274 GTRD no Liver (HepG2) 21696801
chr16 21524880 21526132 ZNF274 GTRD no Liver (HepG2) 21696802
chr16 21524922 21526002 ZNF274 GTRD no Liver (HepG2) 21696804
chr16 21524924 21526514 ZNF274 GTRD no Liver (HepG2) 21696805
chr16 21524925 21526364 ZNF274 GTRD no Liver (HepG2) 21696806
chr16 21524954 21526454 ZNF274 GTRD no Bone Marrow (K562) 21696814
chr16 21524982 21526017 ZNF274 GTRD no Liver (HepG2) 21696815
chr16 21525002 21526527 ZNF274 GTRD no Liver (HepG2) 21696816
chr16 21525039 21526460 ZNF274 GTRD no Liver (HepG2) 21696820
chr16 21525048 21526052 ZNF274 GTRD no Liver (HepG2) 21696821
chr16 21525048 21526055 ZNF274 GTRD no Liver (HepG2) 21696822
chr16 21525054 21526041 ZNF274 GTRD no Liver (HepG2) 21696823
chr16 21525059 21526013 ZNF274 GTRD no Liver (HepG2) 21696824
chr16 21525094 21526037 MYOD GTRD no Muscle (Myoblast) 21696826
chr16 21525155 21526036 ZNF274 GTRD no Bone Marrow (K562) 21696831
chr16 21525173 21526037 ZNF274 GTRD no Bone Marrow (K562) 21696833
chr16 21525185 21526201 ZNF274 GTRD no Bone Marrow (K562) 21696835
chr16 21525203 21526183 ZNF274 GTRD no Bone Marrow (K562) 21696836
chr16 21525207 21526487 ZNF274 GTRD no Liver (HepG2) 21696837
chr16 21525210 21526553 ZNF274 GTRD no Liver (HepG2) 21696838
chr16 21525215 21526016 ZNF274 GTRD no Liver (HepG2) 21696840
chr16 21525226 21526485 ZNF274 GTRD no Bone Marrow (K562) 21696843
chr16 21525234 21526036 ZNF274 GTRD no Liver (HepG2) 21696846
chr16 21525234 21526038 ZNF274 GTRD no Bone Marrow (K562) 21696847
chr16 21525247 21526017 ZNF274 GTRD no Liver (HepG2) 21696849
chr16 21525356 21526986 TCF7L2 GTRD no Colon (HCT116) 21696863
chr16 21525379 21526632 ZNF274 GTRD no Bone Marrow (K562) 21696865
chr16 21525392 21526865 ZNF143 GTRD no Epithelial (MCF-7) 21696866
chr16 21525394 21526854 TCF7L2 GTRD no Colon (HCT116) 21696867
chr16 21525409 21526511 ZNF274 GTRD no Bone Marrow (K562) 21696869
chr16 21525430 21526030 ZNF143 GTRD no Epithelial (MCF-7) 21696872
chr16 21525432 21526066 ZNF143 GTRD no Epithelial (MCF-7) 21696873
chr16 21525433 21526857 ZNF143 GTRD no Epithelial (MCF-7) 21696874
chr16 21525452 21527009 ZNF143 GTRD no Epithelial (MCF-7) 21696877
chr16 21525893 21526285 ZNF274 GTRD no Liver (HepG2) 21696882
chr16 21525937 21526430 ZNF274 GTRD no Bone Marrow (K562) 21696883
chr16 21525958 21526596 ZNF274 GTRD no Liver (HepG2) 21696884
chr16 21525972 21525992 TP53 JASPAR yes 9928605
Genes associated with rs55654246[chr16:21525988], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More