EnhancerDB
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  3. rs55655336[chr16:85358299]
Enhancers that have rs55655336[chr16:85358299]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85333005 85372015 enh16866
Bone Marrow (K562) Brain (SK-N-MC) Liver Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs55655336[chr16:85358299]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85357716 85359955 ZNF274 GTRD no Bone Marrow (K562) 21723534
chr16 85357804 85360071 ZNF274 GTRD no Bone Marrow (K562) 21723535
chr16 85357816 85358441 ZNF274 GTRD no Bone Marrow (K562) 21723536
chr16 85357855 85358545 ZNF274 GTRD no Bone Marrow (K562) 21723537
chr16 85357856 85359964 ZNF274 GTRD no Bone Marrow (K562) 21723538
chr16 85357867 85359940 ZNF143 GTRD no Epithelial (MCF-7) 21723539
chr16 85357919 85358946 TCF7L2 GTRD no Colon (HCT116) 21723540
chr16 85357941 85358583 ZNF274 GTRD no Bone Marrow (K562) 21723541
chr16 85357960 85360013 ZNF143 GTRD no Epithelial (MCF-7) 21723543
chr16 85357962 85359848 ZNF143 GTRD no Epithelial (MCF-7) 21723544
chr16 85357964 85359893 ZNF143 GTRD no Epithelial (MCF-7) 21723545
chr16 85357968 85359955 ZNF274 GTRD no Bone Marrow (K562) 21723546
chr16 85357972 85358450 ZNF274 GTRD no Bone Marrow (K562) 21723547
chr16 85357989 85358334 ZNF274 GTRD no Bone Marrow (K562) 21723548
chr16 85357999 85360049 ZNF274 GTRD no Bone Marrow (K562) 21723549
chr16 85358025 85358351 TCF7L2 GTRD no Colon (HCT116) 21723550
chr16 85358142 85360796 TCF7L2 GTRD no Colon (HCT116) 21723552
chr16 85358251 85360720 TCF7L2 GTRD no Colon (HCT116) 21723553
chr16 85358269 85358969 ZNF274 GTRD no Liver (HepG2) 21723554
chr16 85358286 85358304 SRF JASPAR yes 12047496
chr16 85358288 85358299 CDX2 JASPAR yes 12047497
chr16 85358289 85358300 HOXA10 JASPAR yes 12047498
chr16 85358289 85358301 SRF JASPAR yes 12047499
chr16 85358290 85358299 CDX1 JASPAR yes 12047500
chr16 85358290 85358300 HOXD13 JASPAR yes 12047501
chr16 85358297 85358302 ETS2 TRANSFAC yes 12047502
Genes associated with rs55655336[chr16:85358299], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More