EnhancerDB
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  3. rs55655550[chr2:28870540]
Enhancers that have rs55655550[chr2:28870540]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28854725 28893200 enh18394
Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs55655550[chr2:28870540]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28870521 28870540 REST JASPAR yes 72663763
chr2 28870525 28870541 SOX8 JASPAR yes 72663764
Genes associated with rs55655550[chr2:28870540], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More