EnhancerDB
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  3. rs556577504[chr17:42874220]
Enhancers that have rs556577504[chr17:42874220]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42867613 42875555 enh17184
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Pancreas (Panc1) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs556577504[chr17:42874220]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42874144 42874758 TCF7L2 GTRD no Colon (HCT116) 21762982
chr17 42874217 42874230 SMAD2 JASPAR yes 54414609
Genes associated with rs556577504[chr17:42874220], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More