EnhancerDB
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  3. rs55659252[chr17:75419180]
Enhancers that have rs55659252[chr17:75419180]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 75373666 75445575 enh4617
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs55659252[chr17:75419180]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 75419173 75419183 SREBF1 JASPAR yes 56080439
chr17 75419173 75419183 SREBF2 JASPAR yes 56080440
chr17 75419173 75419183 TBX21 JASPAR yes 56080441
chr17 75419173 75419184 TBX20 JASPAR yes 56080442
chr17 75419173 75419184 TBX2 JASPAR yes 56080443
chr17 75419173 75419186 EOMES JASPAR yes 56080444
chr17 75419174 75419182 MGA JASPAR yes 56080445
Genes associated with rs55659252[chr17:75419180], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More