EnhancerDB
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  3. rs556603727[chr2:232491102]
Enhancers that have rs556603727[chr2:232491102]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232460065 232495135 enh6201
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs556603727[chr2:232491102]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232491088 232491102 ZIC1 JASPAR yes 81727961
chr2 232491095 232491109 PLAG1 JASPAR yes 81727962
chr2 232491095 232491110 NR2C2 JASPAR yes 81727963
chr2 232491096 232491110 RXRB JASPAR yes 81727964
chr2 232491096 232491110 RXRG JASPAR yes 81727965
Genes associated with rs556603727[chr2:232491102], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More