EnhancerDB
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  3. rs556617559[chr1:21667350]
Enhancers that have rs556617559[chr1:21667350]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 21624465 21668955 enh110
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs556617559[chr1:21667350]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 21666478 21670763 ZNF274 GTRD no Liver (HepG2) 107802358
chr1 21667338 21667351 DUXA JASPAR yes 27298688
chr1 21667339 21667350 DUX4 JASPAR yes 27298689
chr1 21667339 21667350 PHOX2A JASPAR yes 27298690
chr1 21667339 21667350 PROP1 JASPAR yes 27298691
chr1 21667349 21667355 TBP TRANSFAC yes 27298692
Genes associated with rs556617559[chr1:21667350], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More