EnhancerDB
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  3. rs556639218[chr6:12348485]
Enhancers that have rs556639218[chr6:12348485]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 12340945 12361575 enh38802
Astrocyte Colon (HCT116) Pancreas Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs556639218[chr6:12348485]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 12348465 12348486 IRF1 JASPAR yes 99964155
chr6 12348465 12348486 ZNF263 JASPAR yes 99964156
chr6 12348469 12348490 IRF1 JASPAR yes 99964157
chr6 12348469 12348490 ZNF263 JASPAR yes 99964158
chr6 12348473 12348494 IRF1 JASPAR yes 99964159
chr6 12348473 12348494 ZNF263 JASPAR yes 99964160
chr6 12348477 12348498 IRF1 JASPAR yes 99964161
chr6 12348477 12348498 ZNF263 JASPAR yes 99964162
chr6 12348481 12348502 IRF1 JASPAR yes 99964163
chr6 12348481 12348502 ZNF263 JASPAR yes 99964164
chr6 12348485 12348506 IRF1 JASPAR yes 99964165
chr6 12348485 12348506 ZNF263 JASPAR yes 99964166
Genes associated with rs556639218[chr6:12348485], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More