EnhancerDB
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  3. rs556660196[chr1:153496383]
Enhancers that have rs556660196[chr1:153496383]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 153476105 153501977 enh12269
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs556660196[chr1:153496383]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 153496372 153496386 PLAG1 JASPAR yes 32256926
chr1 153496379 153496384 SP1 TRANSFAC yes 32256927
chr1 153496380 153496385 SP1 TRANSFAC yes 32256928
chr1 153496380 153496389 THAP1 JASPAR yes 32256929
chr1 153496383 153496387 LFA1 TRANSFAC yes 32256930
Genes associated with rs556660196[chr1:153496383], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More