EnhancerDB
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  3. rs556687423[chr1:21653316]
Enhancers that have rs556687423[chr1:21653316]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 21624465 21668955 enh110
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs556687423[chr1:21653316]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 21653301 21653320 RFX2 JASPAR yes 27296606
chr1 21653311 21653316 TFAP2A TRANSFAC yes 27296607
chr1 21653311 21653317 MZF1 JASPAR yes 27296608
chr1 21653313 21653324 NFKB1 JASPAR yes 27296609
chr1 21653315 21653327 GLI2 JASPAR yes 27296610
Genes associated with rs556687423[chr1:21653316], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More