EnhancerDB
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  3. rs556696214[chr1:52104762]
Enhancers that have rs556696214[chr1:52104762]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52099919 52117655 enh11848
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Uterus Stomach Brain (SK-N-SH) Ovary Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs556696214[chr1:52104762]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52104747 52104762 STAT1 JASPAR yes 28857756
chr1 52104752 52104762 HOXD13 JASPAR yes 28857758
chr1 52104753 52104768 FOXP1 JASPAR yes 28857759
chr1 52104756 52104762 TBP TRANSFAC yes 28857760
chr1 52104760 52104766 HiNF-A TRANSFAC yes 28857761
Genes associated with rs556696214[chr1:52104762], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More