EnhancerDB
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  3. rs556699183[chr19:11060108]
Enhancers that have rs556699183[chr19:11060108]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 11044165 11061272 enh17918
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs556699183[chr19:11060108]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 11059353 11060655 TCF7L2 GTRD no Colon (HCT116) 21849300
chr19 11059419 11060574 TCF7L2 GTRD no Colon (HCT116) 21849301
chr19 11059509 11060534 TCF7L2 GTRD no Colon (HCT116) 21849302
chr19 11059571 11060694 TCF7L2 GTRD no Colon (HCT116) 21849303
chr19 11059619 11060661 ZNF143 GTRD no Epithelial (MCF-7) 21849304
chr19 11059773 11060647 ZNF143 GTRD no Epithelial (MCF-7) 21849305
chr19 11059785 11060400 TCF7L2 GTRD no Colon (HCT116) 21849306
chr19 11060096 11060108 FOXI1 JASPAR yes 112448311
chr19 11060096 11060116 RREB1 JASPAR yes 112448312
chr19 11060097 11060112 FOXP1 JASPAR yes 112448313
chr19 11060100 11060112 FOXI1 JASPAR yes 112448314
chr19 11060105 11060120 SOX21 JASPAR yes 112448315
Genes associated with rs556699183[chr19:11060108], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More