EnhancerDB
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  3. rs556705580[chr17:78771374]
Enhancers that have rs556705580[chr17:78771374]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78745025 78774551 enh4637
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Heart
Transcript factors that have rs556705580[chr17:78771374]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78771369 78771379 SP1 JASPAR yes 56281079
chr17 78771372 78771377 SP1 TRANSFAC yes 56281080
Genes associated with rs556705580[chr17:78771374], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More