EnhancerDB
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  3. rs55671824[chr1:205249814]
Enhancers that have rs55671824[chr1:205249814]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205243649 205259635 enh893
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Heart
Transcript factors that have rs55671824[chr1:205249814]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205246524 205250029 ZNF274 GTRD no Bone Marrow (K562) 21371215
chr1 205246593 205250269 ZNF274 GTRD no Cervix (HeLa-S3) 21371216
chr1 205247337 205250086 ZNF143 GTRD no Epithelial (MCF-7) 21371235
chr1 205247742 205250034 ZNF143 GTRD no Epithelial (MCF-7) 21371240
chr1 205248462 205251020 ZNF143 GTRD no Epithelial (MCF-7) 21371243
chr1 205248482 205249842 ZNF274 GTRD no Bone Marrow (K562) 21371244
chr1 205248643 205249907 ZNF143 GTRD no Epithelial (MCF-7) 21371247
chr1 205248675 205250015 ZNF143 GTRD no Epithelial (MCF-7) 21371249
chr1 205248762 205250048 ZNF143 GTRD no Epithelial (MCF-7) 21371252
chr1 205248768 205250080 ZNF143 GTRD no Epithelial (MCF-7) 21371254
chr1 205248783 205249900 ZNF274 GTRD no Bone Marrow (K562) 21371256
chr1 205248815 205250063 ZNF274 GTRD no Cervix (HeLa-S3) 21371261
chr1 205248844 205249882 ZNF143 GTRD no Epithelial (MCF-7) 21371265
chr1 205249070 205250137 ZNF143 GTRD no Epithelial (MCF-7) 21371290
chr1 205249197 205250204 ZNF143 GTRD no Epithelial (MCF-7) 21371298
chr1 205249312 205250038 ZNF274 GTRD no Blood (GM12878) 21371299
chr1 205249398 205249934 ZNF143 GTRD no Epithelial (MCF-7) 21371300
chr1 205249812 205249817 TFAP2A TRANSFAC yes 34750754
chr1 205249812 205249818 MZF1 JASPAR yes 34750755
chr1 205249812 205249833 ZNF263 JASPAR yes 34750756
Genes associated with rs55671824[chr1:205249814], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More