EnhancerDB
  1. Home
  2. SNP
  3. rs556722471[chr1:201719136]
Enhancers that have rs556722471[chr1:201719136]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201710292 201749335 enh12527
Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Thyroid Uterus Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Heart
Transcript factors that have rs556722471[chr1:201719136]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201717892 201720601 ZNF143 GTRD no Epithelial (MCF-7) 107857084
chr1 201718033 201719157 ZNF143 GTRD no Epithelial (MCF-7) 107857085
chr1 201719117 201719138 IRF1 JASPAR yes 34528336
chr1 201719123 201719144 IRF1 JASPAR yes 34528338
chr1 201719133 201719144 DUX4 JASPAR yes 34528339
Genes associated with rs556722471[chr1:201719136], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More